Biology & Biochemistry
Listando 36 trabajos del autor/autora 38
Lista de trabajos en el área Biology & Biochemistry
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73
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0
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141
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0
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Article
Post-exercise hypotension and skeletal muscle oxygenation is regulated by nitrate-reducing activity of oral bacteria
Cutler, C.; Kiernan, M.; Willis, J. R.; Gallardo-Alfaro, L.; Casas-Agustench, P.; White, D.; Hickson, M.; Gabaldon, T.; Bescos, R.
FREE RADICAL BIOLOGY AND MEDICINE
0891-5849 (2019)
DOI /
10.1016/j.freeradbiomed.2019.07.035
Green submitted
Mentions
481
Twitter
2
Wikipedia
26
News
0
Policy
Article
Genetically encodable bioluminescent system from fungi
Kotlobay, Alexey A.; Sarkisyan, Karen S.; Mokrushina, Yuliana A.; Marcet-Houben, Marina; Serebrovskaya, Ekaterina O.; Markina, Nadezhda M.; Somermeyer, Louisa Gonzalez; Gorokhovatsky, Andrey Y.; Vvedensky, Andrey; Purtov, Konstantin V.; Petushkov, Valentin
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
0027-8424 (2018)
DOI /
10.1073/pnas.1803615115
Green published, Hybrid
Mentions
311
Twitter
1
Wikipedia
11
News
0
Policy
Article
Genome-wide signatures of complex introgression and adaptive evolution in the big cats
Figueiro, Henrique V.; Li, Gang; Trindade, Fernanda J.; Assis, Juliana; Pais, Fabiano; Fernandes, Gabriel; Santos, Sarah H. D.; Hughes, Graham M.; Komissarov, Aleksey; Antunes, Agostinho; Trinca, Cristine S.; Rodrigues, Maira R.; Linderoth, Tyler; Bi, Ke;
SCIENCE ADVANCES
2375-2548 (2017)
DOI /
10.1126/sciadv.1700299
Gold DOAJ, Green published
Mentions
23
Twitter
0
Wikipedia
31
News
0
Policy
Article
Hybridization and emergence of virulence in opportunistic human yeast pathogens
Mixao, Veronica; Gabaldon, Toni
YEAST
0749-503X (2018)
DOI /
10.1002/yea.3242
Green published, Gold other
Mentions
156
Twitter
0
Wikipedia
16
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0
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Article
Biological Processes Modulating Longevity across Primates: A Phylogenetic Genome-Phenome Analysis
Muntane, Gerard; Farre, Xavier; Rodriguez, Juan Antonio; Pegueroles, Cinta; Hughes, David A.; de Magalhaes, Joao Pedro; Gabaldon, Toni; Navarro, Arcadi
MOLECULAR BIOLOGY AND EVOLUTION
0737-4038 (2018)
DOI /
10.1093/molbev/msy105
Green published, Gold other
Mentions
156
Twitter
5
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0
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0
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Article
Fungal evolution: diversity, taxonomy and phylogeny of the Fungi
Naranjo-Ortiz, Miguel A.; Gabaldon, Toni
BIOLOGICAL REVIEWS
1464-7931 (2019)
DOI /
10.1111/brv.12550
Green published, Hybrid
Mentions
90
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0
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4
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0
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Article
Discovery of EMRE in fungi resolves the true evolutionary history of the mitochondrial calcium uniporter
Pittis, Alexandros A.; Goh, Valerie; Cebrian-Serrano, Alberto; Wettmarshausen, Jennifer; Perocchi, Fabiana; Gabaldon, Toni
NATURE COMMUNICATIONS
(2020)
DOI /
10.1038/s41467-020-17705-4
Gold DOAJ, Green published
Mentions
135
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0
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0
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0
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Article
Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication
Legras, Jean-Luc; Galeote, Virginie; Bigey, Frederic; Camarasa, Carole; Marsit, Souhir; Nidelet, Thibault; Sanchez, Isabelle; Couloux, Arnaud; Guy, Julie; Franco-Duarte, Ricardo; Marcet-Houben, Marina; Gabaldon, Toni; Schuller, Dorit; Sampaio, Jose Paulo;
MOLECULAR BIOLOGY AND EVOLUTION
0737-4038 (2018)
DOI /
10.1093/molbev/msy066
Gold other, Green published
Mentions
60
Twitter
0
Wikipedia
5
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0
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Article
Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans
Carrete, Laia; Ksiezopolska, Ewa; Pegueroles, Cinta; Gomez-Molero, Emilia; Saus, Ester; Iraola-Guzman, Susana; Loska, Damian; Bader, Oliver; Fairhead, Cecile; Gabaldon, Toni
CURRENT BIOLOGY
0960-9822 (2018)
DOI /
10.1016/j.cub.2017.11.027
Green published, Hybrid
Mentions
128
Twitter
3
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0
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0
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Article
Fungal evolution: major ecological adaptations and evolutionary transitions
Naranjo-Ortiz, Miguel A.; Gabaldon, Toni
BIOLOGICAL REVIEWS
1464-7931 (2019)
DOI /
10.1111/brv.12510
Hybrid, Green published
Mentions
85
Twitter
0
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0
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0
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Article
Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)
Julca, Irene; Marcet-Houben, Marina; Cruz, Fernando; Gomez-Garrido, Jessica; Gaut, Brandon S.; Diez, Concepcion M.; Gut, Ivo G.; Alioto, Tyler S.; Vargas, Pablo; Gabaldon, Toni
BMC BIOLOGY
(2020)
DOI /
10.1186/s12915-020-00881-6
Green published, Gold other
Mentions
56
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0
Wikipedia
3
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0
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Article
Narrow mutational signatures drive acquisition of multidrug resistance in the fungal pathogen Candida glabrata
Ksiezopolska, Ewa; Angel Schikora-Tamarit, Miquel; Beyer, Reinhard; Carlos Nunez-Rodriguez, Juan; Schuller, Christoph; Gabaldon, Toni
CURRENT BIOLOGY
0960-9822 (2021)
DOI /
10.1016/j.cub.2021.09.084
Green published, Hybrid
Mentions
81
Twitter
0
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0
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0
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Article
MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life
Chorostecki, Uciel; Molina, Manuel; Pryszcz, Leszek P.; Gabaldon, Toni
NUCLEIC ACIDS RESEARCH
0305-1048 (2020)
DOI /
10.1093/nar/gkaa282
Gold DOAJ, Green published
Mentions
76
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0
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0
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0
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Article
The transposable element-rich genome of the cereal pest Sitophilus oryzae
Parisot, Nicolas; Vargas-Chavez, Carlos; Goubert, Clement; Baa-Puyoulet, Patrice; Balmand, Severine; Beranger, Louis; Blanc, Caroline; Bonnamour, Aymeric; Boulesteix, Matthieu; Burlet, Nelly; Calevro, Federica; Callaerts, Patrick; Chancy, Theo; Charles, Hu
BMC BIOLOGY
(2021)
DOI /
10.1186/s12915-021-01158-2
Gold
Mentions
65
Twitter
0
Wikipedia
0
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0
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Review
Advances and Applications in the Quest for Orthologs
Glover, Natasha; Dessimoz, Christophe; Ebersberger, Ingo; Forslund, Sofia K.; Gabaldon, Toni; Huerta-Cepas, Jaime; Martin, Maria-Jesus; Muffato, Matthieu; Patricio, Mateus; Pereira, Cecile; da Silva, Alan Sousa; Wang, Yan; Sonnhammer, Erik; Thomas, Paul D.
MOLECULAR BIOLOGY AND EVOLUTION
0737-4038 (2019)
DOI /
10.1093/molbev/msz150
Green accepted, Green published, Gold other
Mentions
62
Twitter
0
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0
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0
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Article
HaploTypo: a variant-calling pipeline for phased genomes
Pegueroles, Cinta; Mixao, Veronica; Carrete, Laia; Molina, Manu; Gabaldon, Toni
BIOINFORMATICS
1367-4803 (2020)
DOI /
10.1093/bioinformatics/btz933
Gold other, Green published
Mentions
37
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0
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0
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0
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Article
Structural characterization of NORAD reveals a stabilizing role of spacers and two new repeat units
Chorostecki, Uciel; Saus, Ester; Gabaldon, Toni
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL
2001-0370 (2021)
DOI /
10.1016/j.csbj.2021.05.045
Green submitted, Gold, Green published
Mentions
68
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0
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0
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0
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Article
Genomic evidence for a hybrid origin of the yeast opportunistic pathogen Candida albicans
Mixao, Veronica; Gabaldon, Toni
BMC BIOLOGY
(2020)
DOI /
10.1186/s12915-020-00776-6
Gold DOAJ, Green published
Mentions
62
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0
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0
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0
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Review
Relative timing of mitochondrial endosymbiosis and the "pre-mitochondrial symbioses" hypothesis
Gabaldon, Toni
IUBMB LIFE
1521-6543 (2018)
DOI /
10.1002/iub.1950
Green published, Gold other
Mentions
38
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0
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0
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0
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Article
Selection following Gene Duplication Shapes Recent Genome Evolution in the Pea Aphid Acyrthosiphon pisum
Fernandez, Rosa; Marcet-Houben, Marina; Legeai, Fabrice; Richard, Gautier; Robin, Stephanie; Wucher, Valentin; Pegueroles, Cinta; Gabaldon, Toni; Tagu, Denis
MOLECULAR BIOLOGY AND EVOLUTION
0737-4038 (2020)
DOI /
10.1093/molbev/msaa110
Green published, Gold other
Mentions
26
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0
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0
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0
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Article
Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
Julca, Irene; Marcet-Houben, Marina; Vargas, Pablo; Gabaldon, Toni
BMC BIOLOGY
(2018)
DOI /
10.1186/s12915-018-0482-y
Green published, Green submitted, Gold
Mentions
13
Twitter
0
Wikipedia
1
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0
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Article
Human tRNAs with inosine 34 are essential to efficiently translate eukarya-specific low-complexity proteins
Gabriel Torres, Adrian; Rodriguez-Escriba, Marta; Marcet-Houben, Marina; Santos Vieira, Helaine Graziele; Camacho, Noelia; Catena, Helena; Murillo Recio, Marina; Rafels-Ybern, Albert; Reina, Oscar; Miguel Torres, Francisco; Pardo-Saganta, Ana; Gabaldon, To
NUCLEIC ACIDS RESEARCH
0305-1048 (2021)
DOI /
10.1093/nar/gkab461
Green published, Gold
Mentions
24
Twitter
1
Wikipedia
0
News
0
Policy
Article
Fungal evolution: cellular, genomic and metabolic complexity
Naranjo-Ortiz, Miguel A.; Gabaldon, Toni
BIOLOGICAL REVIEWS
1464-7931 (2020)
DOI /
10.1111/brv.12605
Green published, Hybrid
Mentions
24
Twitter
0
Wikipedia
0
News
0
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Article
Differential Expression of Fungal Genes Determines the Lifestyle of Plectosphaerella Strains During Arabidopsis thaliana Colonization
Munoz-Barrios, Antonio; Sopena-Torres, Sara; Ramos, Brisa; Lopez, Gemma; del Hierro, Irene; Diaz-Gonzalez, Sandra; Gonzalez-Melendi, Pablo; Melida, Hugo; Fernandez-Calleja, Vanessa; Mixao, Veronica; Martin-Dacal, Marina; Marcet-Houben, Marina; Gabaldon, To
MOLECULAR PLANT-MICROBE INTERACTIONS
0894-0282 (2020)
DOI /
10.1094/mpmi-03-20-0057-r
Hybrid
Mentions
22
Twitter
0
Wikipedia
0
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0
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Article
PhylomeDB V5: an expanding repository for genome-wide catalogues of annotated gene phylogenies
Fuentes, Diego; Molina, Manuel; Chorostecki, Uciel; Capella-Gutierrez, Salvador; Marcet-Houben, Marina; Gabaldon, Toni
NUCLEIC ACIDS RESEARCH
(2021)
DOI /
10.1093/nar/gkab966
Mentions
18
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0
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0
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0
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Article
Transcriptomic analyses reveal groups of co-expressed, syntenic lncRNAs in four species of the genus Caenorhabditis
Pegueroles, Cinta; Iraola-Guzman, Susana; Chorostecki, Uciel; Ksiezopolska, Ewa; Saus, Ester; Gabaldon, Toni
RNA BIOLOGY
1547-6286 (2019)
DOI /
10.1080/15476286.2019.1572438
Green published, Gold other
Mentions
20
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0
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0
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0
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Article
EvolClust: automated inference of evolutionary conserved gene clusters in eukaryotes
Marcet-Houben, Marina; Gabaldon, Toni
BIOINFORMATICS
1367-4803 (2020)
DOI /
10.1093/bioinformatics/btz706
Hybrid, Green published, Green submitted
Mentions
16
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0
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0
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0
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Article
Shared evolutionary footprints suggest mitochondrial oxidative damage underlies multiple complex I losses in fungi
Angel Schikora-Tamarit, Miquel; Marcet-Houben, Marina; Nosek, Jozef; Gabaldon, Toni
OPEN BIOLOGY
(2021)
DOI /
10.1098/rsob.200362
Gold DOAJ
Mentions
19
Twitter
0
Wikipedia
0
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0
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Article
Phylogenomics Identifies an Ancestral Burst of Gene Duplications Predating the Diversification of Aphidomorpha
Julca, Irene; Marcet-Houben, Marina; Cruz, Fernando; Vargas-Chavez, Carlos; Johnston, John Spencer; Gomez-Garrido, Jessica; Frias, Leonor; Corvelo, Andre; Loska, Damian; Camara, Francisco; Gut, Marta; Alioto, Tyler; Latorre, Amparo; Gabaldon, Toni
MOLECULAR BIOLOGY AND EVOLUTION
0737-4038 (2020)
DOI /
10.1093/molbev/msz261
Hybrid, Green published
Mentions
14
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0
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0
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0
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Article
Misidentification of genome assemblies in public databases: The case of Naumovozyma dairenensis and proposal of a protocol to correct misidentifications
Stavrou, Aimilia A.; Mixao, Veronica; Boekhout, Teun; Gabaldon, Toni
YEAST
0749-503X (2018)
DOI /
10.1002/yea.3303
Gold other, Green published
Mentions
16
Twitter
0
Wikipedia
0
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0
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Article
Gearing up to handle the mosaic nature of life in the quest for orthologs
Forslund, Kristoffer; Pereira, Cecile; Capella-Gutierrez, Salvador; Sousa da Silva, Alan; Altenhoff, Adrian; Huerta-Cepas, Jaime; Muffato, Matthieu; Patricio, Mateus; Vandepoele, Klaas; Ebersberger, Ingo; Blake, Judith; Fernandez Breis, Jesualdo Tomas; Boe
BIOINFORMATICS
1367-4803 (2018)
DOI /
10.1093/bioinformatics/btx542
Hybrid, Green published, Green accepted
Mentions
12
Twitter
0
Wikipedia
0
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0
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Article
CROSSMAPPER: estimating cross-mapping rates and optimizing experimental design in multi-species sequencing studies
Hovhannisyan, Hrant; Hafez, Ahmed; Llorens, Carlos; Gabaldon, Toni
BIOINFORMATICS
1367-4803 (2020)
DOI /
10.1093/bioinformatics/btz626
Green published, Gold other
Mentions
15
Twitter
0
Wikipedia
0
News
0
Policy
Review
Ten Years of Collaborative Progress in the Quest for Orthologs
Linard, Benjamin; Ebersberger, Ingo; McGlynn, Shawn E.; Glover, Natasha; Mochizuki, Tomohiro; Patricio, Mateus; Lecompte, Odile; Nevers, Yannis; Thomas, Paul D.; Gabaldon, Toni; Sonnhammer, Erik; Dessimoz, Christophe; Uchiyama, Ikuo
MOLECULAR BIOLOGY AND EVOLUTION
0737-4038 (2021)
DOI /
10.1093/molbev/msab098
Hybrid, Green published
Mentions
8
Twitter
0
Wikipedia
0
News
0
Policy
Review
Microbiome and colorectal cancer: Roles in carcinogenesis and clinical potential
Saus, Ester; Iraola-Guzman, Susana; Willis, Jesse R.; Brunet-Vega, Anna; Gabaldon, Toni
MOLECULAR ASPECTS OF MEDICINE
0098-2997 (2019)
DOI /
10.1016/j.mam.2019.05.001
Green published, Gold other
Mentions
7
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0
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0
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0
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Article
nextPARS: parallel probing of RNA structures in Illumina
Saus, Ester; Willis, Jesse R.; Pryszcz, Leszek P.; Hafez, Ahmed; Llorens, Carlos; Himmelbauer, Heinz; Gabaldon, Toni
RNA
1355-8382 (2018)
DOI /
10.1261/rna.063073.117
Green published, Green submitted, Bronze
Mentions
1
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0
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0
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0
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Article
SeqEditor: an application for primer design and sequence analysis with or without GTF/GFF files
Hafez, Ahmed; Futami, Ricardo; Arastehfar, Amir; Daneshnia, Farnaz; Miguel, Ana; Roig, Francisco J.; Soriano, Beatriz; Perez-Sanchez, Jaume; Boekhout, Teun; Gabaldon, Toni; Llorens, Carlos
BIOINFORMATICS
1367-4803 (2021)
DOI /
10.1093/bioinformatics/btaa903
