Computer Science
Listando 12 trabajos del autor/autora 38
Lista de trabajos en el área Computer Science
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Article
Precision medicine needs pioneering clinical bioinformaticians
Gomez-Lopez, Gonzalo; Dopazo, Joaquin; Cigudosa, Juan C.; Valencia, Alfonso; Al-Shahrour, Fatima
BRIEFINGS IN BIOINFORMATICS
1467-5463 (2019)
DOI /
10.1093/bib/bbx144
Bronze
Mentions
52
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0
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0
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Article
A versatile workflow to integrate RNA-seq genomic and transcriptomic data into mechanistic models of signaling pathways
Garrido-Rodriguez, Martin; Lopez-Lopez, Daniel; Ortuno, Francisco M.; Pena-Chilet, Maria; Munoz, Eduardo; Calzado, Marco A.; Dopazo, Joaquin
PLOS COMPUTATIONAL BIOLOGY
1553-734X (2021)
DOI /
10.1371/journal.pcbi.1008748
Gold DOAJ, Green published
Mentions
37
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Differential metabolic activity and discovery of therapeutic targets using summarized metabolic pathway models
Cubuk, Cankut; Hidalgo, Marta R.; Amadoz, Alicia; Rian, Kinza; Salavert, Francisco; Pujana, Miguel A.; Mateo, Francesca; Herranz, Carmen; Carbonell-Caballero, Jose; Dopazo, Joaquin
NPJ SYSTEMS BIOLOGY AND APPLICATIONS
(2019)
DOI /
10.1038/s41540-019-0087-2
Green submitted, Green published, Gold
Mentions
22
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0
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1
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Article
Mechanistic modeling of the SARS-CoV-2 disease map
Rian, Kinza; Esteban-Medina, Marina; Hidalgo, Marta R.; Cubuk, Cankut; Falco, Matias M.; Loucera, Carlos; Gunyel, Devrim; Ostaszewski, Marek; Pena-Chilet, Maria; Dopazo, Joaquin
BIODATA MINING
1756-0381 (2021)
DOI /
10.1186/s13040-021-00234-1
Gold, Green published, Green submitted
Mentions
37
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PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources
Perez-Gil, Daniel; Lopez, Francisco J.; Dopazo, Joaquin; Marin-Garcia, Pablo; Rendon, Augusto; Medina, Ignacio
BMC BIOINFORMATICS
1471-2105 (2019)
DOI /
10.1186/s12859-019-2726-4
Gold DOAJ, Green published
Mentions
32
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Reference genome assessment from a population scale perspective: an accurate profile of variability and noise
Carbonell-Caballero, Jose; Amadoz, Alicia; Alonso, Roberto; Hidalgo, Marta R.; Cubuk, Cankut; Conesa, David; Lopez-Quilez, Antonio; Dopazo, Joaquin
BIOINFORMATICS
1367-4803 (2017)
DOI /
10.1093/bioinformatics/btx482
Green published, Gold other
Mentions
26
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A comprehensive database for integrated analysis of omics data in autoimmune diseases
Martorell-Marugan, Jordi; Lopez-Dominguez, Raul; Garcia-Moreno, Adrian; Toro-Dominguez, Daniel; Villatoro-Garcia, Juan Antonio; Barturen, Guillermo; Martin-Gomez, Adoracion; Troule, Kevin; Gomez-Lopez, Gonzalo; Al-Shahrour, Fatima; Gonzalez-Rumayor, Victor
BMC BIOINFORMATICS
1471-2105 (2021)
DOI /
10.1186/s12859-021-04268-4
Green published, Gold
Mentions
6
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ATGC transcriptomics: a web-based application to integrate, explore and analyze de novo transcriptomic data
Gonzalez, Sergio; Clavijo, Bernardo; Rivarola, Maximo; Moreno, Patricio; Fernandez, Paula; Dopazo, Joaquin; Paniego, Norma
BMC BIOINFORMATICS
1471-2105 (2017)
DOI /
10.1186/s12859-017-1494-2
Gold DOAJ, Green published
Mentions
8
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Article
A new parallel pipeline for DNA methylation analysis of long reads datasets
Olanda, Ricardo; Perez, Mariano; Orduna, Juan M.; Tarraga, Joaqun; Dopazo, Joaquin
BMC BIOINFORMATICS
1471-2105 (2017)
DOI /
10.1186/s12859-017-1574-3
Green published, Gold
Mentions
8
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Exploring the druggable space around the Fanconi anemia pathway using machine learning and mechanistic models
Esteban-Medina, Marina; Pena-Chilet, Maria; Loucera, Carlos; Dopazo, Joaquin
BMC BIOINFORMATICS
1471-2105 (2019)
DOI /
10.1186/s12859-019-2969-0
Green published, Green submitted, Gold
Mentions
10
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0
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0
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Article
VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy
Juanes, Jose M.; Gallego, Asuncion; Tarraga, Joaquin; Chaves, Felipe J.; Marin-Garcia, Pablo; Medina, Ignacio; Arnau, Vicente; Dopazo, Joaquin
BMC BIOINFORMATICS
1471-2105 (2017)
DOI /
10.1186/s12859-017-1837-z
Gold DOAJ, Green published
Mentions
4
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Graph-theoretical comparison of normal and tumor networks in identifying BRCA genes
Dopazo, Joaquin; Erten, Cesim
BMC SYSTEMS BIOLOGY
1752-0509 (2017)
DOI /
10.1186/s12918-017-0495-0
Green published, Gold other
