Molecular Biology & Genetics


  Listando 19 trabajos del autor/autora 38
Lista de trabajos en el área Molecular Biology & Genetics
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Article The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia Beekman, Renee; Chapaprieta, Vicente; Russinol, Nuria; Vilarrasa-Blasi, Roser; Verdaguer-Dot, Nuria; Martens, Joost H. A.; Duran-Ferrer, Marti; Kulis, Marta; Serra, Francois; Javierre, Biola M.; Wingett, Steven W.; Clot, Guillem; Queiros, Ana C.; Castellan NATURE MEDICINE 1078-8956 (2018) DOI / 10.1038/s41591-018-0028-4 Green accepted
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Article Challenges and guidelines toward 4D nucleome data and model standards Marti-Renom, Marc A.; Almouzni, Genevieve; Bickmore, Wendy A.; Bystricky, Kerstin; Cavalli, Giacomo; Fraser, Peter; Gasser, Susan M.; Giorgetti, Luca; Heard, Edith; Nicodemi, Mario; Nollmann, Marcelo; Orozco, Modesto; Pombo, Ana; Torres-Padilla, Maria-Elen NATURE GENETICS 1061-4036 (2018) DOI / 10.1038/s41588-018-0236-3 Green accepted
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Article CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction Galan, Silvia; Machnik, Nick; Kruse, Kai; Diaz, Noelia; Marti-Renom, Marc A.; Vaquerizas, Juan M. NATURE GENETICS 1061-4036 (2020) DOI / 10.1038/s41588-020-00712-y
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Article Promoter bivalency favors an open chromatin architecture in embryonic stem cells Mas, Gloria; Blanco, Enrique; Ballare, Cecilia; Sanso, Miriam; Spill, Yannick G.; Hu, Deqing; Aoi, Yuki; Le Dily, Francois; Shilatifard, Ali; Marti-Renom, Marc A.; Di Croce, Luciano NATURE GENETICS 1061-4036 (2018) DOI / 10.1038/s41588-018-0218-5
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Article CTCF is dispensable for immune cell transdifferentiation but facilitates an acute inflammatory response Stik, Gregoire; Vidal, Enrique; Barrero, Mercedes; Cuartero, Sergi; Vila-Casadesus, Maria; Mendieta-Esteban, Julen; Tian, Tian, V; Choi, Jinmi; Berenguer, Clara; Abad, Amaya; Borsari, Beatrice; Le Dily, Francois; Cramer, Patrick; Marti-Renom, Marc A.; Stad NATURE GENETICS 1061-4036 (2020) DOI / 10.1038/s41588-020-0643-0 Green accepted
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Article Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming Stadhouders, Ralph; Vidal, Enrique; Serra, Francois; Di Stefano, Bruno; Le Dily, Francois; Quilez, Javier; Gomez, Antonio; Collombet, Samuel; Berenguer, Clara; Cuartero, Yasmina; Hecht, Jochen; Filion, Guillaume J.; Beato, Miguel; Marti-Renom, Marc A.; Gra NATURE GENETICS 1061-4036 (2018) DOI / 10.1038/s41588-017-0030-7 Green accepted
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Article Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling Nir, Guy; Farabella, Irene; Estrada, Cynthia Perez; Ebeling, Carl G.; Beliveau, Brian J.; Sasaki, Hiroshi M.; Lee, S. Dean; Nguyen, Son C.; McCole, Ruth B.; Chattoraj, Shyamtanu; Erceg, Jelena; Abed, Jumana AlHaj; Martins, Nuno M. C.; Nguyen, Huy Q.; Hanna PLOS GENETICS 1553-7390 (2018) DOI / 10.1371/journal.pgen.1007872 Green published, Green submitted, Gold
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Article The impact of chromosomal fusions on 3D genome folding and recombination in the germ line Vara, Covadonga; Paytuvi-Gallart, Andreu; Cuartero, Yasmina; Alvarez-Gonzalez, Lucia; Marin-Gual, Laia; Garcia, Francisca; Florit-Sabater, Beatriu; Capilla, Laia; Ana Sanchez-Guillen, Rosa; Sarrate, Zaida; Aiese Cigliano, Riccardo; Sanseverino, Walter; Sea NATURE COMMUNICATIONS (2021) DOI / 10.1038/s41467-021-23270-1 Gold DOAJ, Green published
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Article Specific Contributions of Cohesin-SA1 and Cohesin-SA2 to TADs and Polycomb Domains in Embryonic Stem Cells Cuadrado, Ana; Gimenez-Llorente, Daniel; Kojic, Aleksandar; Rodriguez-Corsino, Miriam; Cuartero, Yasmina; Martin-Serrano, Guillermo; Gomez-Lopez, Gonzalo; Marti-Renom, Marc A.; Losada, Ana CELL REPORTS 2211-1247 (2019) DOI / 10.1016/j.celrep.2019.05.078 Green published, Gold
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Article Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization Kojic, Aleksandar; Cuadrado, Ana; De Koninck, Magali; Gimenez-Llorente, Daniel; Rodriguez-Corsino, Miriam; Gomez-Lopez, Gonzalo; Le Dily, Francois; Marti-Renom, Marc A.; Losada, Ana NATURE STRUCTURAL & MOLECULAR BIOLOGY 1545-9993 (2018) DOI / 10.1038/s41594-018-0070-4 Green accepted, Green submitted
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Article Three-dimensional genome organization via triplex-forming RNAs Farabella, Irene; Di Stefano, Marco; Soler-Vila, Paula; Marti-Marimon, Maria; Marti-Renom, Marc A. NATURE STRUCTURAL & MOLECULAR BIOLOGY 1545-9993 (2021) DOI / 10.1038/s41594-021-00678-3
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Article Three-Dimensional Genomic Structure and Cohesin Occupancy Correlate with Transcriptional Activity during Spermatogenesis Vara, Covadonga; Paytuvi-Gallart, Andreu; Cuartero, Yasmina; Le Dily, Frangois; Garcia, Francisca; Salva-Castro, Judit; Gomez-H, Laura; Julia, Eva; Moutinho, Catia; Aiese Cigliano, Riccardo; Sanseverino, Walter; Fornas, Oscar; Pendas, Alberto M.; Heyn, Hol CELL REPORTS 2211-1247 (2019) DOI / 10.1016/j.celrep.2019.06.037 Green published, Gold
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Article 4D Genome Rewiring during Oncogene-Induced and Replicative Senescence Sati, Satish; Bonev, Boyan; Szabo, Quentin; Jost, Daniel; Bensadoun, Paul; Serra, Francois; Loubiere, Vincent; Papadopoulos, Giorgio Lucio; Rivera-Mulia, Juan-Carlos; Fritsch, Lauriane; Bouret, Pauline; Castillo, David; Gelpi, Josep L., I; Orozco, Modesto; MOLECULAR CELL 1097-2765 (2020) DOI / 10.1016/j.molcel.2020.03.007 Green published, Gold other, Green accepted
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Article Impact of Chromosome Fusions on 3D Genome Organization and Gene Expression in Budding Yeast Di Stefano, Marco; Di Giovanni, Francesca; Pozharskaia, Vasilisa; Gomar-Alba, Merce; Bau, Davide; Carey, Lucas B.; Marti-Renom, Marc A.; Mendoza, Manuel GENETICS 0016-6731 (2020) DOI / 10.1534/genetics.119.302978 Hybrid, Green published
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Editorial Material TADs without borders Farabella, Irene; Marti-Renom, Marc A. NATURE GENETICS 1061-4036 (2020) DOI / 10.1038/s41588-020-0670-x
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Article Lamin B1 mapping reveals the existence of dynamic and functional euchromatin lamin B1 domains Pascual-Reguant, Laura; Blanco, Enrique; Galan, Silvia; Le Dily, Francois; Cuartero, Yasmina; Serra-Bardenys, Gemma; Di Carlo, Valerio; Iturbide, Ane; Pau Cebria-Costa, Joan; Nonell, Lara; Garcia de Herreros, Antonio; Di Croce, Luciano; Marti-Renom, Marc A NATURE COMMUNICATIONS (2018) DOI / 10.1038/s41467-018-05912-z Green published, Gold
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Review Challenges for visualizing three-dimensional data in genomic browsers Goodstadt, Mike; Marti-Renom, Marc A. FEBS LETTERS 0014-5793 (2017) DOI / 10.1002/1873-3468.12778 Green published, Gold other
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Article Muscle progenitor specification and myogenic differentiation are associated with changes in chromatin topology Zhang, Nan; Mendieta-Esteban, Julen; Magli, Alessandro; Lilja, Karin C.; Perlingeiro, Rita C. R.; Marti-Renom, Marc A.; Tsirigos, Aristotelis; Dynlacht, Brian David NATURE COMMUNICATIONS (2020) DOI / 10.1038/s41467-020-19999-w Gold, Green published
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Review 4D nucleome modeling Di Stefano, Marco; Paulsen, Jonas; Jost, Daniel; Marti-Renom, Marc A. CURRENT OPINION IN GENETICS & DEVELOPMENT 0959-437X (2021) DOI / 10.1016/j.gde.2020.10.004 Green published, Hybrid

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