Molecular Biology & Genetics


  Listando 21 trabajos del autor/autora 38
Lista de trabajos en el área Molecular Biology & Genetics
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Article The impact of sex on gene expression across human tissues Oliva, Meritxell; Munoz-Aguirre, Manuel; Kim-Hellmuth, Sarah; Wucher, Valentin; Gewirtz, Ariel D. H.; Cotter, Daniel J.; Parsana, Princy; Kasela, Silva; Balliu, Brunilda; Vinuela, Ana; Castel, Stephane E.; Mohammadi, Pejman; Aguet, Francois; Zou, Yuxin; Kh SCIENCE 0036-8075 (2020) DOI / 10.1126/science.aba3066 Green submitted, Green accepted
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Article Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk Castel, Stephane E.; Cervera, Alejandra; Mohammadi, Pejman; Aguet, Francois; Reverter, Ferran; Wolman, Aaron; Guigo, Roderic; Iossifov, Ivan; Vasileva, Ana; Lappalainen, Tuuli NATURE GENETICS 1061-4036 (2018) DOI / 10.1038/s41588-018-0192-y Green accepted, Green published
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Article The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia Beekman, Renee; Chapaprieta, Vicente; Russinol, Nuria; Vilarrasa-Blasi, Roser; Verdaguer-Dot, Nuria; Martens, Joost H. A.; Duran-Ferrer, Marti; Kulis, Marta; Serra, Francois; Javierre, Biola M.; Wingett, Steven W.; Clot, Guillem; Queiros, Ana C.; Castellan NATURE MEDICINE 1078-8956 (2018) DOI / 10.1038/s41591-018-0028-4 Green accepted
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Article High-throughput annotation of full-length long noncoding RNAs with capture long-read sequencing Lagarde, Julien; Uszczynska-Ratajczak, Barbara; Carbonell, Silvia; Perez-Lluch, Silvia; Abad, Amaya; Davis, Carrie; Gingeras, Thomas R.; Frankish, Adam; Harrow, Jennifer; Guigo, Roderic; Johnson, Rory NATURE GENETICS 1061-4036 (2017) DOI / 10.1038/ng.3988 Green accepted, Green published
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Article A limited set of transcriptional programs define major cell types Breschi, Alessandra; Munoz-Aguirre, Manuel; Wucher, Valentin; Davis, Carrie A.; Garrido-Martin, Diego; Djebali, Sarah; Gillis, Jesse; Pervouchine, Dmitri D.; Vlasova, Anna; Dobin, Alexander; Zaleski, Chris; Drenkow, Jorg; Danyko, Cassidy; Scavelli, Alexand GENOME RESEARCH 1088-9051 (2020) DOI / 10.1101/gr.263186.120 Green published, Gold other
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Article Damage-responsive elements in Drosophila regeneration Vizcaya-Molina, Elena; Klein, Cecilia C.; Serras, Florenci; Mishra, Rakesh K.; Guigo, Roderic; Corominas, Montserrat GENOME RESEARCH 1088-9051 (2018) DOI / 10.1101/gr.233098.117 Green published, Hybrid
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Review Comparative transcriptomics in human and mouse Breschi, Alessandra; Gingeras, Thomas R.; Guigo, Roderic NATURE REVIEWS GENETICS 1471-0056 (2017) DOI / 10.1038/nrg.2017.19 Green accepted
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Review Towards a complete map of the human long non-coding RNA transcriptome Uszczynska-Ratajczak, Barbara; Lagarde, Julien; Frankish, Adam; Guigo, Roderic; Johnson, Rory NATURE REVIEWS GENETICS 1471-0056 (2018) DOI / 10.1038/s41576-018-0017-y Green accepted
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Article Genomic history of the origin and domestication of common bean unveils its closest sister species Rendon-Anaya, Martha; Montero-Vargas, Josaphat M.; Saburido-Alvarez, Soledad; Vlasova, Anna; Capella-Gutierrez, Salvador; Ordaz-Ortiz, Jose Juan; Mario Aguilar, O.; Vianello-Brondani, Rosana P.; Santalla, Marta; Delaye, Luis; Gabaldon, Toni; Gepts, Paul; W GENOME BIOLOGY 1465-6906 (2017) DOI / 10.1186/s13059-017-1190-6 Gold, Green published
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Article Enteric infection induces Lark-mediated intron retention at the 5 ' end of Drosophila genes Bou Sleiman, Maroun; Frochaux, Michael Vincent; Andreani, Tommaso; Osman, Dani; Guigo, Roderic; Deplancke, Bart GENOME BIOLOGY 1465-6906 (2020) DOI / 10.1186/s13059-019-1918-6 Gold DOAJ, Green published
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Article Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features Lanzos, Andres; Carlevaro-Fita, Joana; Mularoni, Loris; Reverter, Ferran; Palumbo, Emilio; Guigo, Roderic; Johnson, Rory SCIENTIFIC REPORTS 2045-2322 (2017) DOI / 10.1038/srep41544 Gold DOAJ, Green published
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Article Genetic Predisposition to Alzheimer's Disease Is Associated with Enlargement of Perivascular Spaces in Centrum Semiovale Region Ciampa, Iacopo; Operto, Gregory; Falcon, Carles; Minguillon, Carolina; Castro de Moura, Manuel; Pineyro, David; Esteller, Manel; Luis Molinuevo, Jose; Guigo, Roderic; Navarro, Arcadi; Gispert, Juan; Vilor-Tejedor, Natalia GENES (2021) DOI / 10.3390/genes12060825 Gold DOAJ, Green published
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Article The genomic basis of evolutionary differentiation among honey bees Fouks, Bertrand; Brand, Philipp; Nguyen, Hung N.; Herman, Jacob; Camara, Francisco; Ence, Daniel; Hagen, Darren E.; Hoff, Katharina J.; Nachweide, Stefanie; Romoth, Lars; Walden, Kimberly K. O.; Guigo, Roderic; Stanke, Mario; Narzisi, Giuseppe; Yandell, Ma GENOME RESEARCH 1088-9051 (2021) DOI / 10.1101/gr.272310.120 Hybrid, Green published, Green accepted
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Article Identification and analysis of splicing quantitative trait loci across multiple tissues in the human genome Garrido-Martin, Diego; Borsari, Beatrice; Calvo, Miquel; Reverter, Ferran; Guigo, Roderic NATURE COMMUNICATIONS (2021) DOI / 10.1038/s41467-020-20578-2 Gold DOAJ, Green published
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Article Enhancers with tissue-specific activity are enriched in intronic regions Borsari, Beatrice; Villegas-Miron, Pablo; Perez-Lluch, Silvia; Turpin, Isabel; Laayouni, Hafid; Segarra-Casas, Alba; Bertranpetit, Jaume; Guigo, Roderic; Acosta, Sandra GENOME RESEARCH 1088-9051 (2021) DOI / 10.1101/gr.270371.120
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Article Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity Ma, Siming; Avanesov, Andrei S.; Porter, Emily; Lee, Byung Cheon; Mariotti, Marco; Zemskaya, Nadezhda; Guigo, Roderic; Moskalev, Alexey A.; Gladyshev, Vadim N. AGING CELL 1474-9718 (2018) DOI / 10.1111/acel.12740 Gold DOAJ, Green published
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Article The rate and spectrum of mosaic mutations during embryogenesis revealed by RNA sequencing of 49 tissues Muyas, Francesc; Zapata, Luis; Guigo, Roderic; Ossowski, Stephan GENOME MEDICINE 1756-994X (2020) DOI / 10.1186/s13073-020-00746-1 Gold DOAJ, Green published
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Article FA-nf: A Functional Annotation Pipeline for Proteins from Non-Model Organisms Implemented in Nextflow Vlasova, Anna; Hermoso Pulido, Toni; Camara, Francisco; Ponomarenko, Julia; Guigo, Roderic GENES (2021) DOI / 10.3390/genes12101645 Green published, Gold
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Article ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data Rodriguez-Martin, Bernardo; Palumbo, Emilio; Marco-Sola, Santiago; Griebel, Thasso; Ribeca, Paolo; Alonso, Graciela; Rastrojo, Alberto; Aguado, Begona; Guigo, Roderic; Djebali, Sarah BMC GENOMICS 1471-2164 (2017) DOI / 10.1186/s12864-016-3404-9 Green published, Gold other
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Article Dynamics of microRNA expression during mouse prenatal development Rahmanian, Sorena; Murad, Rabi; Breschi, Alessandra; Zeng, Weihua; Mackiewicz, Mark; Williams, Brian; Davis, Carrie A.; Roberts, Brian; Meadows, Sarah; Moore, Dianna; Trout, Diane; Zaleski, Chris; Dobin, Alex; Sei, Lei-Hoon; Drenkow, Jorg; Scavelli, Alex; GENOME RESEARCH 1088-9051 (2019) DOI / 10.1101/gr.248997.119 Green published, Green accepted, Gold other
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Article bsAS, an antisense long non-coding RNA, essential for correct wing development through regulation of blistered/DSRF isoform usage Perez-Lluch, Silvia; Klein, Cecilia C.; Breschi, Alessandra; Ruiz-Romero, Marina; Abad, Amaya; Palumbo, Emilio; Bekish, Lyazzat; Arnan, Carme; Guigo, Roderic PLOS GENETICS 1553-7390 (2020) DOI / 10.1371/journal.pgen.1009245 Gold DOAJ, Green published

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