Trabajos de Florentino Fdez-Riverola

Computer Science


  Listando 30 trabajos del autor/autora 38
Lista de trabajos en el área Computer Science
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Article MAHMI database: a comprehensive MetaHit-based resource for the study of the mechanism of action of the human microbiota Blanco-Miguez, Aitor; Gutierrez-Jacome, Alberto; Fdez-Riverola, Florentino; Lourenco, Analia; Sanchez, Borja DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 1758-0463 (2017) DOI / 10.1093/database/baw157 Gold DOAJ, Green published
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Article Bicycle: a bioinformatics pipeline to analyze bisulfite sequencing data Grana, Osvaldo; Lopez-Fernandez, Hugo; Fdez-Riverola, Florentino; Gonzalez Pisano, David; Glez-Pena, Daniel BIOINFORMATICS 1367-4803 (2018) DOI / 10.1093/bioinformatics/btx778 Bronze
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Article DEWE: A novel tool for executing differential expression RNA-Seq workflows in biomedical research Lopez-Fernandez, Hugo; Blanco-Miguez, Aitor; Fdez-Riverola, Florentino; Sanchez, Borja; Lourenco, Analia COMPUTERS IN BIOLOGY AND MEDICINE 0010-4825 (2019) DOI / 10.1016/j.compbiomed.2019.02.021 Green published
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Article Real-time polyp detection model using convolutional neural networks Nogueira-Rodriguez, Alba; Dominguez-Carbajales, Ruben; Campos-Tato, Fernando; Herrero, Jesus; Puga, Manuel; Remedios, David; Rivas, Laura; Sanchez, Eloy; Iglesias, Agueda; Cubiella, Joaquin; Fdez-Riverola, Florentino; Lopez-Fernandez, Hugo; Reboiro-Jato, M NEURAL COMPUTING & APPLICATIONS 0941-0643 (2021) DOI / 10.1007/s00521-021-06496-4 Hybrid
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Article BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results Blanco-Miguez, Aitor; Fdez-Riverola, Florentino; Sanchez, Borja; Lourenco, Analia PLOS ONE 1932-6203 (2018) DOI / 10.1371/journal.pone.0205286 Gold DOAJ, Green published
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Article Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm Perez-Perez, Martin; Perez-Rodriguez, Gael; Blanco-Miguez, Aitor; Fdez-Riverola, Florentino; Valencia, Alfonso; Krallinger, Martin; Lourenco, Analia JOURNAL OF CHEMINFORMATICS 1758-2946 (2019) DOI / 10.1186/s13321-019-0363-6 Gold DOAJ, Green published
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Article Deep Neural Networks approaches for detecting and classifying colorectal polyps Nogueira-Rodriguez, Alba; Dominguez-Carbajales, Ruben; Lopez-Fernandez, Hugo; Iglesias, Agueda; Cubiella, Joaquin; Fdez-Riverola, Florentino; Reboiro-Jato, Miguel; Glez-Pena, Daniel NEUROCOMPUTING 0925-2312 (2021) DOI / 10.1016/j.neucom.2020.02.123 Gold other
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Article Metatax: Metataxonomics with a Compi-Based Pipeline for Precision Medicine Grana-Castro, Osvaldo; Lopez-Fernandez, Hugo; Nogueira-Rodriguez, Alba; Fdez-Riverola, Florentino; Al-Shahrour, Fatima; Glez-Pena, Daniel INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 1913-2751 (2020) DOI / 10.1007/s12539-020-00368-6
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Article A framework to extract biomedical knowledge from gluten-related tweets: The case of dietary concerns in digital era Perez-Perez, Martin; Igrejas, Gilberto; Fdez-Riverola, Florentino; Lourenco, Analia ARTIFICIAL INTELLIGENCE IN MEDICINE 0933-3657 (2021) DOI / 10.1016/j.artmed.2021.102131 Hybrid, Green published, Green submitted
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Article Perceptions of the use of intelligent information access systems in university level active learning activities among teachers of biomedical subjects Aparicio, Fernando; Luz Morales-Botello, Maria; Rubio, Margarita; Hernando, Asuncion; Munoz, Rafael; Lopez-Fernandez, Hugo; Glez-Pena, Daniel; Fdez-Riverola, Florentino; de la Villa, Manuel; Mana, Manuel; Gachet, Diego; de Buenaga, Manuel INTERNATIONAL JOURNAL OF MEDICAL INFORMATICS 1386-5056 (2018) DOI / 10.1016/j.ijmedinf.2017.12.016 Gold other
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Article Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects Vazquez, Noe; Vieira, Cristina P.; Amorim, Barbara S. R.; Torres, Andre; Lopez-Fernandez, Hugo; Fdez-Riverola, Florentino; Sousa, Jose L. R.; Reboiro-Jato, Miguel; Vieira, Jorge INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 1913-2751 (2018) DOI / 10.1007/s12539-018-0282-7 Green published, Hybrid
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Article RUbioSeq plus : A multiplatform application that executes parallelized pipelines to analyse next-generation sequencing data Rubio-Camarillo, Miriam; Lopez-Fernandez, Hugo; Gomez-Lopez, Gonzalo; Carro, Angel; Maria Fernandez, Jose; Fustero Torre, Coral; Fdez-Riverola, Florentino; Glez-Pena, Daniel COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 0169-2607 (2017) DOI / 10.1016/j.cmpb.2016.10.008 Green published
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Article On the Identification of Clinically Relevant Bacterial Amino Acid Changes at the Whole Genome Level Using Auto-PSS-Genome Lopez-Fernandez, Hugo; Vieira, Cristina P.; Ferreira, Pedro; Gouveia, Paula; Fdez-Riverola, Florentino; Reboiro-Jato, Miguel; Vieira, Jorge INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 1913-2751 (2021) DOI / 10.1007/s12539-021-00439-2
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Article S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data Lopez-Fernandez, Hugo; Araujo, Jose E.; Jorge, Susana; Glez-Pena, Daniel; Reboiro-Jato, Miguel; Santos, Hugo M.; Fdez-Riverola, Florentino; Capelo, Jose L. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 0169-2607 (2018) DOI / 10.1016/j.cmpb.2017.11.024
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Article Online visibility of software-related web sites: The case of biomedical text mining tools Perez-Rodriguez, Gael; Perez-Perez, Martin; Fdez-Riverola, Florentino; Lourenco, Anglia INFORMATION PROCESSING & MANAGEMENT 0306-4573 (2019) DOI / 10.1016/j.ipm.2018.11.011 Green published
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Article GC4S: A bioinformatics-oriented Java software library of reusable graphical user interface components Lopez-Fernandez, Hugo; Reboiro-Jato, Miguel; Glez-Pena, Daniel; Laza, Rosalie; Pavon, Reyes; Fdez-Riverola, Florentino PLOS ONE 1932-6203 (2018) DOI / 10.1371/journal.pone.0204474 Gold DOAJ, Green published
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Article HaemoKBS: A knowledge-based system for real-time, continuous categorisation of adverse reactions in blood recipients Ramoa, Augusto; Condeco, Jorge; Fdez-Riverola, Florentino; Lourenco, Analia NEUROCOMPUTING 0925-2312 (2021) DOI / 10.1016/j.neucom.2020.04.101 Green published
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Article Bioinformatics Protocols for Quickly Obtaining Large-Scale Data Sets for Phylogenetic Inferences Lopez-Fernandez, Hugo; Duque, Pedro; Henriques, Silvia; Vazquez, Noe; Fdez-Riverola, Florentino; Vieira, Cristina P.; Reboiro-Jato, Miguel; Vieira, Jorge INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 1913-2751 (2019) DOI / 10.1007/s12539-018-0312-5
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Article Using evolutionary computation for discovering spam patterns from e-mail samples Ruano-Ordas, David; Fdez-Riverola, Florentino; Mendez, Jose R. INFORMATION PROCESSING & MANAGEMENT 0306-4573 (2018) DOI / 10.1016/j.ipm.2017.12.001
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Article EvoPPI 1.0: a Web Platform for Within- and Between-Species Multiple Interactome Comparisons and Application to Nine PolyQ Proteins Determining Neurodegenerative Diseases Vazquez, Noe; Rocha, Sara; Lopez-Fernandez, Hugo; Torres, Andre; Camacho, Rui; Fdez-Riverola, Florentino; Vieira, Jorge; Vieira, Cristina P.; Reboiro-Jato, Miguel INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 1913-2751 (2019) DOI / 10.1007/s12539-019-00317-y
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Article Application of agent-based modelling to assess single-molecule transport across the cell envelope of E. coli Maia, Paulo; Perez-Rodriguez, Gael; Perez-Perez, Martin; Fdez-Riverola, Florentino; Lourenco, Analia; Azevedo, Nuno F. COMPUTERS IN BIOLOGY AND MEDICINE 0010-4825 (2019) DOI / 10.1016/j.compbiomed.2019.02.020 Green published
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Article Concept drift in e-mail datasets: An empirical study with practical implications Ruano-Ordas, David; Fdez-Riverola, Florentino; Mendez, Jose R. INFORMATION SCIENCES 0020-0255 (2018) DOI / 10.1016/j.ins.2017.10.049
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Article Understanding the social evolution of the Java community in Stack Overflow: A 10-year study of developer interactions Blanco, Guillermo; Perez-Lopez, Roi; Fdez-Riverola, Florentino; Garcia Lourenco, Analia Maria FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE 0167-739X (2020) DOI / 10.1016/j.future.2019.12.021 Green published
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Article Mining the sociome for Health Informatics: Analysis of therapeutic lifestyle adherence of diabetic patients in Twitter Perez-Rodriguez, Gael; Perez-Perez, Martin; Fdez-Riverola, Florentino; Lourenco, Analia FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE 0167-739X (2020) DOI / 10.1016/j.future.2020.04.025 Green published
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Article BDBM 1.0: A Desktop Application for Efficient Retrieval and Processing of High-Quality Sequence Data and Application to the Identification of the Putative Coffea S-Locus Vazquez, Noe; Lopez-Fernandez, Hugo; Vieira, Cristina P.; Fdez-Riverola, Florentino; Vieira, Jorge; Reboiro-Jato, Miguel INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 1913-2751 (2019) DOI / 10.1007/s12539-019-00320-3
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Editorial Material Advanced Practical Applications of Computational Biology & Bioinformatics: PACBB'15 Rocha, Miguel; Fdez-Riverola, Florentino CURRENT BIOINFORMATICS 1574-8936 (2018) DOI / 10.2174/157489361306181107184700 Green published
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Article Computational prediction of the bioactivity potential of proteomes based on expert knowledge Blanco-Miguez, Aitor; Blanco, Guillermo; Gutierrez-Jacome, Alberto; Fdez-Riverola, Florentino; Sanchez, Borja; Lourenco, Analia JOURNAL OF BIOMEDICAL INFORMATICS 1532-0464 (2019) DOI / 10.1016/j.jbi.2019.103121 Green published
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Article Optimized convolutional neural network architectures for efficient on-device vision-based object detection Rodriguez-Conde, Ivan; Campos, Celso; Fdez-Riverola, Florentino NEURAL COMPUTING & APPLICATIONS (2021) DOI / 10.1007/s00521-021-06830-w
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Article Computational Approach to the Systematic Prediction of Glycolytic Abilities: Looking Into Human Microbiota Blanco, Guillermo; Sanchez, Borja; Ruiz, Lorena; Fdez-Riverola, Florentino; Margolles, Abelardo; Lourenco, Analia IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 1545-5963 (2021) DOI / 10.1109/tcbb.2020.2978461
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Article Collaborative relation annotation and quality analysis in Markyt environment Perez-Perez, Martin; Perez-Rodriguez, Gael; Fdez-Riverola, Florentino; Lourenco, Analia DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 1758-0463 (2017) DOI / 10.1093/database/bax090 Gold DOAJ, Green published

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