Biology & Biochemistry
Listando 36 trabajos del autor/autora 38
Lista de trabajos en el área Biology & Biochemistry
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Article
Proteome-wide observation of the phenomenon of life on the edge of solubility
Vecchi, Giulia; Sormanni, Pietro; Mannini, Benedetta; Vandelli, Andrea; Tartaglia, Gian Gaetano; Dobson, Christopher M.; Hartl, F. Ulrich; Vendruscolo, Michele
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
0027-8424 (2020)
DOI /
10.1073/pnas.1910444117
Hybrid, Green published
Mentions
143
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0
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2
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Article
The mutational landscape of a prion-like domain
Bolognesi, Benedetta; Faure, Andre J.; Seuma, Mireia; Schmiedel, Jorn M.; Gaetano Tartaglia, Gian; Lehner, Ben
NATURE COMMUNICATIONS
(2019)
DOI /
10.1038/s41467-019-12101-z
Green submitted, Green published, Gold
Mentions
40
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0
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7
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0
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Article
Discovering the 3 ' UTR-mediated regulation of alpha-synuclein
Marchese, Domenica; Botta-Orfila, Teresa; Cirillo, Davide; Antonio Rodriguez, Juan; Maria Livi, Carmen; Fernandez-Santiago, Ruben; Ezquerra, Mario; Marti, Maria J.; Bechara, Elias; Gaetano Tartaglia, Gian
NUCLEIC ACIDS RESEARCH
0305-1048 (2017)
DOI /
10.1093/nar/gkx1048
Green published, Gold, Green submitted
Mentions
30
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1
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6
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0
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Article
FUS Phase Separation Is Modulated by a Molecular Chaperone and Methylation of Arginine Cation-pi Interactions
Qamar, Seema; Wang, Guozhen; Randle, Suzanne J.; Ruggeri, Francesco Simone; Varela, Juan A.; Lin, Julie Qiaojin; Phillips, Emma C.; Miyashita, Akinori; Williams, Declan; Strohl, Florian; Meadows, William; Ferry, Rodylyn; Dardov, Victoria J.; Tartaglia, Gia
CELL
0092-8674 (2018)
DOI /
10.1016/j.cell.2018.03.056
Green published, Gold other
Mentions
41
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0
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7
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0
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Article
SAMMSON fosters cancer cell fitness by concertedly enhancing mitochondrial and cytosolic translation
Vendramin, Roberto; Verheyden, Yvessa; Ishikawa, Hideaki; Goedert, Lucas; Nicolas, Emilien; Saraf, Kritika; Armaos, Alexandros; Delli Ponti, Riccardo; Izumikawa, Keichi; Mestdagh, Pieter; Lafontaine, Denis L. J.; Gaetano Tartaglia, Gian; Takahashi, Nobuhir
NATURE STRUCTURAL & MOLECULAR BIOLOGY
1545-9993 (2018)
DOI /
10.1038/s41594-018-0143-4
Green accepted, Green submitted
Mentions
11
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5
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Article
BacFITBase: a database to assess the relevance of bacterial genes during host infection
Macho Rendon, Javier; Lang, Benjamin; Gaetano Tartaglia, Gian; Torrent Burgas, Marc
NUCLEIC ACIDS RESEARCH
0305-1048 (2020)
DOI /
10.1093/nar/gkz931
Green published, Gold
Mentions
93
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0
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2
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0
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Article
RNA structure drives interaction with proteins
de Groot, Natalia Sanchez; Armaos, Alexandros; Grana-Montes, Ricardo; Alriquet, Marion; Calloni, Giulia; Vabulas, R. Martin; Tartaglia, Gian Gaetano
NATURE COMMUNICATIONS
(2019)
DOI /
10.1038/s41467-019-10923-5
Green published, Gold
Mentions
69
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1
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Editorial Material
Phase separation drives X-chromosome inactivation: a hypothesis
Cerase, Andrea; Armaos, Alexandros; Neumayer, Christoph; Avner, Philip; Guttman, Mitchell; Gaetano Tartaglia, Gian
NATURE STRUCTURAL & MOLECULAR BIOLOGY
1545-9993 (2019)
DOI /
10.1038/s41594-019-0223-0
Green published
Mentions
39
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0
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Article
RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data
Lang, Benjamin; Armaos, Alexandros; Tartaglia, Gian G.
NUCLEIC ACIDS RESEARCH
0305-1048 (2019)
DOI /
10.1093/nar/gky967
Green published, Gold
Mentions
9
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0
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1
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Article
DualSeqDB: the host-pathogen dual RNA sequencing database for infection processes
Macho Rendon, Javier; Lang, Benjamin; Ramos Llorens, Marc; Gaetano Tartaglia, Gian; Torrent Burgas, Marc
NUCLEIC ACIDS RESEARCH
0305-1048 (2021)
DOI /
10.1093/nar/gkaa890
Green published, Gold
Mentions
21
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0
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1
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Article
RNA-binding and prion domains: the Yin and Yang of phase separation
Gotor, Nieves Lorenzo; Armaos, Alexandros; Calloni, Giulia; Burgas, Marc Torrent; Vabulas, R. Martin; de Groot, Natalia Sanchez; Tartaglia, Gian Gaetano
NUCLEIC ACIDS RESEARCH
0305-1048 (2020)
DOI /
10.1093/nar/gkaa681
Green published, Gold, Green submitted
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7
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1
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Letter
Quantitative predictions of protein interactions with long noncoding RNAs
Cirillo, Davide; Blanco, Mario; Armaos, Alexandros; Buness, Andreas; Avner, Philip; Guttman, Mitchell; Cerase, Andrea; Gaetano Tartaglia, Gian
NATURE METHODS
1548-7091 (2017)
DOI /
10.1038/nmeth.4100
Mentions
14
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0
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1
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Article
RNA as the stone guest of protein aggregation
Louka, Alexandra; Zacco, Elsa; Temussi, Piero Andrea; Tartaglia, Gian Gaetano; Pastore, Annalisa
NUCLEIC ACIDS RESEARCH
0305-1048 (2020)
DOI /
10.1093/nar/gkaa822
Green published, Gold
Mentions
25
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Article
Posttranscriptional regulation of colonic epithelial repair by RNA binding protein IMP1/IGF2BP1
Chatterji, Priya; Williams, Patrick A.; Whelan, Kelly A.; Samper, Fernando C.; Andres, Sarah F.; Simon, Lauren A.; Parham, Louis R.; Mizuno, Rei; Lundsmith, Emma T.; Lee, David S. M.; Liang, Shun; Wijeratne, H. R. Sagara; Marti, Stefanie; Chau, Lillian; Gi
EMBO REPORTS
1469-221X (2019)
DOI /
10.15252/embr.201847074
Green published, Green submitted
Mentions
15
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0
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0
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Article
Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs
Ribeiro, Diogo M.; Zanzoni, Andreas; Cipriano, Andrea; Delli Ponti, Riccardo; Spinelli, Lionel; Ballarino, Monica; Bozzoni, Irene; Gaetano Tartaglia, Gian; Brun, Christine
NUCLEIC ACIDS RESEARCH
0305-1048 (2018)
DOI /
10.1093/nar/gkx1169
Green published, Gold
Mentions
9
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0
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1
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Article
Fibril-induced glutamine-/asparagine-rich prions recruit stress granule proteins in mammalian cells
Riemschoss, Katrin; Arndt, Verena; Bolognesi, Benedetta; Von Eisenhart-Rothe, Philipp; Liu, Shu; Buravlova, Oleksandra; Duernberger, Yvonne; Paulsen, Lydia; Hornberger, Annika; Hossinger, Andre; Lorenzo-Gotor, Nieves; Hogl, Sebastian; Muller, Stephan A.; T
LIFE SCIENCE ALLIANCE
(2019)
DOI /
10.26508/lsa.201800280
Gold DOAJ, Green published
Mentions
19
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Article
Modelling of SHMT1 riboregulation predicts dynamic changes of serine and glycine levels across cellular compartments
Monti, Michele; Guiducci, Giulia; Paone, Alessio; Rinaldo, Serena; Giardina, Giorgio; Liberati, Francesca Romana; Cutruzzola, Francesca; Tartaglia, Gian Gaetano
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL
2001-0370 (2021)
DOI /
10.1016/j.csbj.2021.05.019
Green published, Gold
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1
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0
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1
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Article
RNA as a key factor in driving or preventing self-assembly of the TAR DNA-binding protein 43
Zacco, Elsa; Grana-Montes, Ricardo; Martin, Stephen R.; Sanchez de Groot, Natalia; Alfano, Caterina; Gaetano Tartaglia, Gian; Pastore, Annalisa
JOURNAL OF MOLECULAR BIOLOGY
0022-2836 (2019)
DOI /
10.1016/j.jmb.2019.01.028
Green accepted, Green published, Gold other
Mentions
15
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Article
Structural analysis of SARS-CoV-2 genome and predictions of the human interactome
Vandelli, Andrea; Monti, Michele; Milanetti, Edoardo; Armaos, Alexandros; Rupert, Jakob; Zacco, Elsa; Bechara, Elias; Ponti, Riccardo Delli; Tartaglia, Gian Gaetano
NUCLEIC ACIDS RESEARCH
0305-1048 (2020)
DOI /
10.1093/nar/gkaa864
Green published, Gold
Mentions
19
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Article
The moonlighting RNA-binding activity of cytosolic serine hydroxymethyltransferase contributes to control compartmentalization of serine metabolism
Guiducci, Giulia; Paone, Alessio; Tramonti, Angela; Giardina, Giorgio; Rinaldo, Serena; Bouzidi, Amani; Magnifico, Maria C.; Marani, Marina; Menendez, Javier A.; Fatica, Alessandro; Macone, Alberto; Armaos, Alexandros; Tartaglia, Gian G.; Contestabile, Rob
NUCLEIC ACIDS RESEARCH
0305-1048 (2019)
DOI /
10.1093/nar/gkz129
Green published, Green submitted, Gold
Mentions
12
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0
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Article
Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins
Lang, Benjamin; Yang, Jae-Seong; Garriga-Canut, Mireia; Speroni, Silvia; Aschern, Moritz; Gili, Maria; Hoffmann, Tobias; Tartaglia, Gian Gaetano; Maurer, Sebastian P.
NUCLEIC ACIDS RESEARCH
0305-1048 (2021)
DOI /
10.1093/nar/gkab490
Green published, Gold
Mentions
4
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1
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0
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0
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Review
Long non-coding RNA-polycomb intimate rendezvous
Cerase, Andrea; Tartaglia, Gian Gaetano
OPEN BIOLOGY
(2020)
DOI /
10.1098/rsob.200126
Gold, Green published
Mentions
8
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0
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0
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Article
Assembly of Proteins by Free RNA during the Early Phase of Proteostasis Stress
Alriquet, Marion; Martinez-Limon, Adrian; Hanspach, Gerd; Hengesbach, Martin; Tartaglia, Gian G.; Calloni, Giulia; Vabulas, R. Martin
JOURNAL OF PROTEOME RESEARCH
1535-3893 (2019)
DOI /
10.1021/acs.jproteome.9b00143
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9
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Article
RNA-protein interactions: Central players in coordination of regulatory networks
Armaos, Alexandros; Zacco, Elsa; Sanchez de Groot, Natalia; Gaetano Tartaglia, Gian
BIOESSAYS
0265-9247 (2020)
DOI /
10.1002/bies.202000118
Green published, Hybrid
Mentions
5
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0
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0
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Article
A high-throughput approach to profile RNA structure
Delli Ponti, Riccardo; Marti, Stefanie; Armaos, Alexandros; Gaetano Tartaglia, Gian
NUCLEIC ACIDS RESEARCH
0305-1048 (2017)
DOI /
10.1093/nar/gkw1094
Green published, Gold, Green submitted
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3
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0
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Review
Zooming in on protein-RNA interactions: a multi-level workflow to identify interaction partners
Colantoni, Alessio; Rupert, Jakob; Vandelli, Andrea; Tartaglia, Gian Gaetano; Zacco, Elsa
BIOCHEMICAL SOCIETY TRANSACTIONS
0300-5127 (2020)
DOI /
10.1042/bst20191059
Green published, Hybrid
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5
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0
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0
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Article
Post-transcriptional regulatory patterns revealed by protein-RNA interactions
Zanzoni, Andreas; Spinelli, Lionel; Ribeiro, Diogo M.; Tartaglia, Gian Gaetano; Brun, Christine
SCIENTIFIC REPORTS
2045-2322 (2019)
DOI /
10.1038/s41598-019-40939-2
Green published, Gold
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3
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0
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Review
In silico, in vitro, and in vivo Approaches to Identify Molecular Players in Fragile X Tremor and Ataxia Syndrome
Haify, Saif N.; Botta-Orfila, Teresa; Hukema, Renate K.; Tartaglia, Gian Gaetano
FRONTIERS IN MOLECULAR BIOSCIENCES
(2020)
DOI /
10.3389/fmolb.2020.00031
Gold DOAJ, Green published
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5
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Article
Long non-coding RNA uc.291 controls epithelial differentiation by interfering with the ACTL6A/BAF complex
Panatta, Emanuele; Lena, Anna Maria; Mancini, Mara; Smirnov, Artem; Marini, Alberto; Ponti, Riccardo Delli; BottaOrfila, Teresa; Tartaglia, Gian Gaetano; Mauriello, Alessandro; Zhang, Xinna; Calin, George A.; Melino, Gerry; Candi, Eleonora
EMBO REPORTS
1469-221X (2020)
DOI /
10.15252/embr.201846734
Green published, Hybrid
Mentions
4
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0
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Article
A Method for RNA Structure Prediction Shows Evidence for Structure in lncRNAs
Delli Ponti, Riccardo; Armaos, Alexandros; Marti, Stefanie; Gaetano Tartaglia, Gian
FRONTIERS IN MOLECULAR BIOSCIENCES
(2018)
DOI /
10.3389/fmolb.2018.00111
Green published, Green submitted, Gold
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5
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0
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Article
Protein Syndesmos is a novel RNA-binding protein that regulates primary cilia formation
Avolio, Rosario; Jarvelin, Aino I.; Mohammed, Shabaz; Agliarulo, Ilenia; Condelli, Valentina; Zoppoli, Pietro; Calice, Giovanni; Sarnataro, Daniela; Bechara, Elias; Tartaglia, Gian G.; Landriscina, Matteo; Castello, Alfredo; Esposito, Franca; Matassa, Dani
NUCLEIC ACIDS RESEARCH
0305-1048 (2018)
DOI /
10.1093/nar/gky873
Gold DOAJ, Green published, Green accepted
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1
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0
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0
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Article
Determination of primary microRNA processing in clinical samples by targeted pri-miR-sequencing
Conrad, Thomas; Ntini, Evgenia; Lang, Benjamin; Cozzuto, Luca; Andersen, Jesper B.; Marquardt, Jens U.; Ponomarenko, Julia; Tartaglia, Gian Gaetano; Orom, Ulf A. Vang
RNA
1355-8382 (2020)
DOI /
10.1261/rna.076240.120
Green accepted, Bronze, Green published
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1
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0
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0
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Article
CROSSalive: a web server for predicting the in vivo structure of RNA molecules
Ponti, Riccardo Delli; Armaos, Alexandros; Vandelli, Andrea; Tartaglia, Gian Gaetano
BIOINFORMATICS
1367-4803 (2020)
DOI /
10.1093/bioinformatics/btz666
Green submitted, Hybrid, Green published
Mentions
3
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0
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0
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0
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Article
omiXcore: a web server for prediction of protein interactions with large RNA
Armaos, Alexandros; Cirillo, Davide; Gaetano Tartaglia, Gian
BIOINFORMATICS
1367-4803 (2017)
DOI /
10.1093/bioinformatics/btx361
Hybrid, Green published
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1
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Article
Aggregation is a Context-Dependent Constraint on Protein Evolution
Monti, Michele; Armaos, Alexandros; Fantini, Marco; Pastore, Annalisa; Tartaglia, Gian Gaetano
FRONTIERS IN MOLECULAR BIOSCIENCES
(2021)
DOI /
10.3389/fmolb.2021.678115
Gold, Green published, Green submitted
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2
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Article
Insights on protein thermal stability: a graph representation of molecular interactions
Miotto, Mattia; Olimpieri, Pier Paolo; Di Rienzo, Lorenzo; Ambrosetti, Francesco; Corsi, Pietro; Lepore, Rosalba; Tartaglia, Gian Gaetano; Milanetti, Edoardo
BIOINFORMATICS
1367-4803 (2019)
DOI /
10.1093/bioinformatics/bty1011
Green published, Hybrid, Green submitted