Biology & Biochemistry


  Listando 36 trabajos del autor/autora 38
Lista de trabajos en el área Biology & Biochemistry
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Article Proteome-wide observation of the phenomenon of life on the edge of solubility Vecchi, Giulia; Sormanni, Pietro; Mannini, Benedetta; Vandelli, Andrea; Tartaglia, Gian Gaetano; Dobson, Christopher M.; Hartl, F. Ulrich; Vendruscolo, Michele PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 0027-8424 (2020) DOI / 10.1073/pnas.1910444117 Hybrid, Green published
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Article The mutational landscape of a prion-like domain Bolognesi, Benedetta; Faure, Andre J.; Seuma, Mireia; Schmiedel, Jorn M.; Gaetano Tartaglia, Gian; Lehner, Ben NATURE COMMUNICATIONS (2019) DOI / 10.1038/s41467-019-12101-z Green submitted, Green published, Gold
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Article Discovering the 3 ' UTR-mediated regulation of alpha-synuclein Marchese, Domenica; Botta-Orfila, Teresa; Cirillo, Davide; Antonio Rodriguez, Juan; Maria Livi, Carmen; Fernandez-Santiago, Ruben; Ezquerra, Mario; Marti, Maria J.; Bechara, Elias; Gaetano Tartaglia, Gian NUCLEIC ACIDS RESEARCH 0305-1048 (2017) DOI / 10.1093/nar/gkx1048 Green published, Gold, Green submitted
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Article FUS Phase Separation Is Modulated by a Molecular Chaperone and Methylation of Arginine Cation-pi Interactions Qamar, Seema; Wang, Guozhen; Randle, Suzanne J.; Ruggeri, Francesco Simone; Varela, Juan A.; Lin, Julie Qiaojin; Phillips, Emma C.; Miyashita, Akinori; Williams, Declan; Strohl, Florian; Meadows, William; Ferry, Rodylyn; Dardov, Victoria J.; Tartaglia, Gia CELL 0092-8674 (2018) DOI / 10.1016/j.cell.2018.03.056 Green published, Gold other
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Article SAMMSON fosters cancer cell fitness by concertedly enhancing mitochondrial and cytosolic translation Vendramin, Roberto; Verheyden, Yvessa; Ishikawa, Hideaki; Goedert, Lucas; Nicolas, Emilien; Saraf, Kritika; Armaos, Alexandros; Delli Ponti, Riccardo; Izumikawa, Keichi; Mestdagh, Pieter; Lafontaine, Denis L. J.; Gaetano Tartaglia, Gian; Takahashi, Nobuhir NATURE STRUCTURAL & MOLECULAR BIOLOGY 1545-9993 (2018) DOI / 10.1038/s41594-018-0143-4 Green accepted, Green submitted
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Article BacFITBase: a database to assess the relevance of bacterial genes during host infection Macho Rendon, Javier; Lang, Benjamin; Gaetano Tartaglia, Gian; Torrent Burgas, Marc NUCLEIC ACIDS RESEARCH 0305-1048 (2020) DOI / 10.1093/nar/gkz931 Green published, Gold
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Article RNA structure drives interaction with proteins de Groot, Natalia Sanchez; Armaos, Alexandros; Grana-Montes, Ricardo; Alriquet, Marion; Calloni, Giulia; Vabulas, R. Martin; Tartaglia, Gian Gaetano NATURE COMMUNICATIONS (2019) DOI / 10.1038/s41467-019-10923-5 Green published, Gold
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Editorial Material Phase separation drives X-chromosome inactivation: a hypothesis Cerase, Andrea; Armaos, Alexandros; Neumayer, Christoph; Avner, Philip; Guttman, Mitchell; Gaetano Tartaglia, Gian NATURE STRUCTURAL & MOLECULAR BIOLOGY 1545-9993 (2019) DOI / 10.1038/s41594-019-0223-0 Green published
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Article RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data Lang, Benjamin; Armaos, Alexandros; Tartaglia, Gian G. NUCLEIC ACIDS RESEARCH 0305-1048 (2019) DOI / 10.1093/nar/gky967 Green published, Gold
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Article DualSeqDB: the host-pathogen dual RNA sequencing database for infection processes Macho Rendon, Javier; Lang, Benjamin; Ramos Llorens, Marc; Gaetano Tartaglia, Gian; Torrent Burgas, Marc NUCLEIC ACIDS RESEARCH 0305-1048 (2021) DOI / 10.1093/nar/gkaa890 Green published, Gold
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Article RNA-binding and prion domains: the Yin and Yang of phase separation Gotor, Nieves Lorenzo; Armaos, Alexandros; Calloni, Giulia; Burgas, Marc Torrent; Vabulas, R. Martin; de Groot, Natalia Sanchez; Tartaglia, Gian Gaetano NUCLEIC ACIDS RESEARCH 0305-1048 (2020) DOI / 10.1093/nar/gkaa681 Green published, Gold, Green submitted
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Letter Quantitative predictions of protein interactions with long noncoding RNAs Cirillo, Davide; Blanco, Mario; Armaos, Alexandros; Buness, Andreas; Avner, Philip; Guttman, Mitchell; Cerase, Andrea; Gaetano Tartaglia, Gian NATURE METHODS 1548-7091 (2017) DOI / 10.1038/nmeth.4100
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Article RNA as the stone guest of protein aggregation Louka, Alexandra; Zacco, Elsa; Temussi, Piero Andrea; Tartaglia, Gian Gaetano; Pastore, Annalisa NUCLEIC ACIDS RESEARCH 0305-1048 (2020) DOI / 10.1093/nar/gkaa822 Green published, Gold
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Article Posttranscriptional regulation of colonic epithelial repair by RNA binding protein IMP1/IGF2BP1 Chatterji, Priya; Williams, Patrick A.; Whelan, Kelly A.; Samper, Fernando C.; Andres, Sarah F.; Simon, Lauren A.; Parham, Louis R.; Mizuno, Rei; Lundsmith, Emma T.; Lee, David S. M.; Liang, Shun; Wijeratne, H. R. Sagara; Marti, Stefanie; Chau, Lillian; Gi EMBO REPORTS 1469-221X (2019) DOI / 10.15252/embr.201847074 Green published, Green submitted
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Article Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs Ribeiro, Diogo M.; Zanzoni, Andreas; Cipriano, Andrea; Delli Ponti, Riccardo; Spinelli, Lionel; Ballarino, Monica; Bozzoni, Irene; Gaetano Tartaglia, Gian; Brun, Christine NUCLEIC ACIDS RESEARCH 0305-1048 (2018) DOI / 10.1093/nar/gkx1169 Green published, Gold
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Article Fibril-induced glutamine-/asparagine-rich prions recruit stress granule proteins in mammalian cells Riemschoss, Katrin; Arndt, Verena; Bolognesi, Benedetta; Von Eisenhart-Rothe, Philipp; Liu, Shu; Buravlova, Oleksandra; Duernberger, Yvonne; Paulsen, Lydia; Hornberger, Annika; Hossinger, Andre; Lorenzo-Gotor, Nieves; Hogl, Sebastian; Muller, Stephan A.; T LIFE SCIENCE ALLIANCE (2019) DOI / 10.26508/lsa.201800280 Gold DOAJ, Green published
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Article Modelling of SHMT1 riboregulation predicts dynamic changes of serine and glycine levels across cellular compartments Monti, Michele; Guiducci, Giulia; Paone, Alessio; Rinaldo, Serena; Giardina, Giorgio; Liberati, Francesca Romana; Cutruzzola, Francesca; Tartaglia, Gian Gaetano COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL 2001-0370 (2021) DOI / 10.1016/j.csbj.2021.05.019 Green published, Gold
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Article RNA as a key factor in driving or preventing self-assembly of the TAR DNA-binding protein 43 Zacco, Elsa; Grana-Montes, Ricardo; Martin, Stephen R.; Sanchez de Groot, Natalia; Alfano, Caterina; Gaetano Tartaglia, Gian; Pastore, Annalisa JOURNAL OF MOLECULAR BIOLOGY 0022-2836 (2019) DOI / 10.1016/j.jmb.2019.01.028 Green accepted, Green published, Gold other
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Article Structural analysis of SARS-CoV-2 genome and predictions of the human interactome Vandelli, Andrea; Monti, Michele; Milanetti, Edoardo; Armaos, Alexandros; Rupert, Jakob; Zacco, Elsa; Bechara, Elias; Ponti, Riccardo Delli; Tartaglia, Gian Gaetano NUCLEIC ACIDS RESEARCH 0305-1048 (2020) DOI / 10.1093/nar/gkaa864 Green published, Gold
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Article The moonlighting RNA-binding activity of cytosolic serine hydroxymethyltransferase contributes to control compartmentalization of serine metabolism Guiducci, Giulia; Paone, Alessio; Tramonti, Angela; Giardina, Giorgio; Rinaldo, Serena; Bouzidi, Amani; Magnifico, Maria C.; Marani, Marina; Menendez, Javier A.; Fatica, Alessandro; Macone, Alberto; Armaos, Alexandros; Tartaglia, Gian G.; Contestabile, Rob NUCLEIC ACIDS RESEARCH 0305-1048 (2019) DOI / 10.1093/nar/gkz129 Green published, Green submitted, Gold
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Article Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins Lang, Benjamin; Yang, Jae-Seong; Garriga-Canut, Mireia; Speroni, Silvia; Aschern, Moritz; Gili, Maria; Hoffmann, Tobias; Tartaglia, Gian Gaetano; Maurer, Sebastian P. NUCLEIC ACIDS RESEARCH 0305-1048 (2021) DOI / 10.1093/nar/gkab490 Green published, Gold
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Review Long non-coding RNA-polycomb intimate rendezvous Cerase, Andrea; Tartaglia, Gian Gaetano OPEN BIOLOGY (2020) DOI / 10.1098/rsob.200126 Gold, Green published
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Article Assembly of Proteins by Free RNA during the Early Phase of Proteostasis Stress Alriquet, Marion; Martinez-Limon, Adrian; Hanspach, Gerd; Hengesbach, Martin; Tartaglia, Gian G.; Calloni, Giulia; Vabulas, R. Martin JOURNAL OF PROTEOME RESEARCH 1535-3893 (2019) DOI / 10.1021/acs.jproteome.9b00143
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Article RNA-protein interactions: Central players in coordination of regulatory networks Armaos, Alexandros; Zacco, Elsa; Sanchez de Groot, Natalia; Gaetano Tartaglia, Gian BIOESSAYS 0265-9247 (2020) DOI / 10.1002/bies.202000118 Green published, Hybrid
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Article A high-throughput approach to profile RNA structure Delli Ponti, Riccardo; Marti, Stefanie; Armaos, Alexandros; Gaetano Tartaglia, Gian NUCLEIC ACIDS RESEARCH 0305-1048 (2017) DOI / 10.1093/nar/gkw1094 Green published, Gold, Green submitted
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Review Zooming in on protein-RNA interactions: a multi-level workflow to identify interaction partners Colantoni, Alessio; Rupert, Jakob; Vandelli, Andrea; Tartaglia, Gian Gaetano; Zacco, Elsa BIOCHEMICAL SOCIETY TRANSACTIONS 0300-5127 (2020) DOI / 10.1042/bst20191059 Green published, Hybrid
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Article Post-transcriptional regulatory patterns revealed by protein-RNA interactions Zanzoni, Andreas; Spinelli, Lionel; Ribeiro, Diogo M.; Tartaglia, Gian Gaetano; Brun, Christine SCIENTIFIC REPORTS 2045-2322 (2019) DOI / 10.1038/s41598-019-40939-2 Green published, Gold
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Review In silico, in vitro, and in vivo Approaches to Identify Molecular Players in Fragile X Tremor and Ataxia Syndrome Haify, Saif N.; Botta-Orfila, Teresa; Hukema, Renate K.; Tartaglia, Gian Gaetano FRONTIERS IN MOLECULAR BIOSCIENCES (2020) DOI / 10.3389/fmolb.2020.00031 Gold DOAJ, Green published
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Article Long non-coding RNA uc.291 controls epithelial differentiation by interfering with the ACTL6A/BAF complex Panatta, Emanuele; Lena, Anna Maria; Mancini, Mara; Smirnov, Artem; Marini, Alberto; Ponti, Riccardo Delli; BottaOrfila, Teresa; Tartaglia, Gian Gaetano; Mauriello, Alessandro; Zhang, Xinna; Calin, George A.; Melino, Gerry; Candi, Eleonora EMBO REPORTS 1469-221X (2020) DOI / 10.15252/embr.201846734 Green published, Hybrid
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Article A Method for RNA Structure Prediction Shows Evidence for Structure in lncRNAs Delli Ponti, Riccardo; Armaos, Alexandros; Marti, Stefanie; Gaetano Tartaglia, Gian FRONTIERS IN MOLECULAR BIOSCIENCES (2018) DOI / 10.3389/fmolb.2018.00111 Green published, Green submitted, Gold
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Article Protein Syndesmos is a novel RNA-binding protein that regulates primary cilia formation Avolio, Rosario; Jarvelin, Aino I.; Mohammed, Shabaz; Agliarulo, Ilenia; Condelli, Valentina; Zoppoli, Pietro; Calice, Giovanni; Sarnataro, Daniela; Bechara, Elias; Tartaglia, Gian G.; Landriscina, Matteo; Castello, Alfredo; Esposito, Franca; Matassa, Dani NUCLEIC ACIDS RESEARCH 0305-1048 (2018) DOI / 10.1093/nar/gky873 Gold DOAJ, Green published, Green accepted
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Article Determination of primary microRNA processing in clinical samples by targeted pri-miR-sequencing Conrad, Thomas; Ntini, Evgenia; Lang, Benjamin; Cozzuto, Luca; Andersen, Jesper B.; Marquardt, Jens U.; Ponomarenko, Julia; Tartaglia, Gian Gaetano; Orom, Ulf A. Vang RNA 1355-8382 (2020) DOI / 10.1261/rna.076240.120 Green accepted, Bronze, Green published
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Article CROSSalive: a web server for predicting the in vivo structure of RNA molecules Ponti, Riccardo Delli; Armaos, Alexandros; Vandelli, Andrea; Tartaglia, Gian Gaetano BIOINFORMATICS 1367-4803 (2020) DOI / 10.1093/bioinformatics/btz666 Green submitted, Hybrid, Green published
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Article omiXcore: a web server for prediction of protein interactions with large RNA Armaos, Alexandros; Cirillo, Davide; Gaetano Tartaglia, Gian BIOINFORMATICS 1367-4803 (2017) DOI / 10.1093/bioinformatics/btx361 Hybrid, Green published
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Article Aggregation is a Context-Dependent Constraint on Protein Evolution Monti, Michele; Armaos, Alexandros; Fantini, Marco; Pastore, Annalisa; Tartaglia, Gian Gaetano FRONTIERS IN MOLECULAR BIOSCIENCES (2021) DOI / 10.3389/fmolb.2021.678115 Gold, Green published, Green submitted
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Article Insights on protein thermal stability: a graph representation of molecular interactions Miotto, Mattia; Olimpieri, Pier Paolo; Di Rienzo, Lorenzo; Ambrosetti, Francesco; Corsi, Pietro; Lepore, Rosalba; Tartaglia, Gian Gaetano; Milanetti, Edoardo BIOINFORMATICS 1367-4803 (2019) DOI / 10.1093/bioinformatics/bty1011 Green published, Hybrid, Green submitted

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