MHC-I Genotype Restricts the Oncogenic Mutational Landscape
Marty, Rachel; Kaabinejadian, Saghar; Rossell, David; Slifker, Michael J.; van de Haar, Joris; Engin, Hatice Billur; de Prisco, Nicola; Ideker, Trey; Hildebrand, William H.; Font-Burgada, Joan; Carter, Hannah
CELL
2017
VL / 171 - BP / 1272 - EP / +
abstract
MHC-I molecules expose the intracellular protein content on the cell surface, allowing T cells to detect foreign or mutated peptides. The combination of six MHC-I alleles each individual carries defines the sub-peptidome that can be effectively presented. We applied this concept to human cancer, hypothesizing that oncogenic mutations could arise in gaps in personal MHC-I presentation. To validate this hypothesis, we developed and applied a residuecentric patient presentation score to 9,176 cancer patients across 1,018 recurrent oncogenic mutations. We found that patient MHC-I genotype-based scores could predict which mutations were more likely to emerge in their tumor. Accordingly, poor presentation of a mutation across patients was correlated with higher frequency among tumors. These results support that MHC-I genotype-restricted immunoediting during tumor formation shapes the landscape of oncogenic mutations observed in clinically diagnosed tumors and paves the way for predicting personal cancer susceptibilities from knowledge of MHC-I genotype.
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Bronze, Green accepted
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Molecular Biology & Genetics
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